Home | Blog | Software | Publications | GitHub


Publications

  1. Marcus Winter, Loreen Thürmann, Zuguang Gu, Gerrit Schüürmann, Gunda Herberth, Denise Hinz, Martin von Bergen, Hauke Harms, Sven Olek, Stefan Röder, Michael Borte, Roland Eils, Irina Lehmann, Saskia Trump, The benzene metabolite 1,4-benzoquinone reduces regulatory T-cell function: A potential mechanism for tobacco smoke-associated atopic dermatitis. The Journal of allergy and clinical immunology 2017. PubMed.
  2. Federico Vita, Cosimo Taiti, Antonio Pompeiano, Zuguang Gu, Emilio Lo Presti, Larisa Whitney, Michele Monti, Giuseppe Di Miceli, Dario Giambalvo, Paolo Ruisi, Lorenzo Guglielminetti, Stefano Mancuso, Aromatic and proteomic analyses corroborate the distinction between Mediterranean landraces and modern varieties of durum wheat. Scientific reports 2016. PubMed.
  3. Saskia Trump, Matthias Bieg, Zuguang Gu, Loreen Thürmann, Tobias Bauer, Mario Bauer, Naveed Ishaque, Stefan Röder, Lei Gu, Gunda Herberth, Christian Lawerenz, Michael Borte, Matthias Schlesner, Christoph Plass, Nicolle Diessl, Markus Eszlinger, Oliver Mücke, Horst-Dietrich Elvers, Dirk K Wissenbach, Martin von Bergen, Carl Herrmann, Dieter Weichenhan, Rosalind J Wright, Irina Lehmann, Roland Eils, Prenatal maternal stress and wheeze in children: novel insights into epigenetic regulation. Scientific reports 2016. PubMed citescites66.
  4. Zuguang Gu, Roland Eils, Matthias Schlesner, Complex heatmaps reveal patterns and correlations in multidimensional genomic data. Bioinformatics (Oxford, England) 2016. PubMed citescites2222.
  5. Zuguang Gu, Roland Eils, Matthias Schlesner, HilbertCurve: an R/Bioconductor package for high-resolution visualization of genomic data. Bioinformatics (Oxford, England) 2016. PubMed.
  6. Zuguang Gu, Roland Eils, Matthias Schlesner, gtrellis: an R/Bioconductor package for making genome-level Trellis graphics. BMC bioinformatics 2016. PubMed.
  7. Tobias Bauer, Saskia Trump, Naveed Ishaque, Loreen Thürmann, Lei Gu, Mario Bauer, Matthias Bieg, Zuguang Gu, Dieter Weichenhan, Jan-Philipp Mallm, Stefan Röder, Gunda Herberth, Eiko Takada, Oliver Mücke, Marcus Winter, Kristin M Junge, Konrad Grützmann, Ulrike Rolle-Kampczyk, Qi Wang, Christian Lawerenz, Michael Borte, Tobias Polte, Matthias Schlesner, Michaela Schanne, Stefan Wiemann, Christina Geörg, Hendrik G Stunnenberg, Christoph Plass, Karsten Rippe, Junichiro Mizuguchi, Carl Herrmann, Roland Eils, Irina Lehmann, Environment-induced epigenetic reprogramming in genomic regulatory elements in smoking mothers and their children. Molecular systems biology 2016. PubMed citescites1515.
  8. Jenny Wegert, Naveed Ishaque, Romina Vardapour, Christina Geörg, Zuguang Gu, Matthias Bieg, Barbara Ziegler, Sabrina Bausenwein, Nasenien Nourkami, Nicole Ludwig, Andreas Keller, Clemens Grimm, Susanne Kneitz, Richard D Williams, Tas Chagtai, Kathy Pritchard-Jones, Peter van Sluis, Richard Volckmann, Jan Koster, Rogier Versteeg, Tomas Acha, Maureen J O'Sullivan, Peter K Bode, Felix Niggli, Godelieve A Tytgat, Harm van Tinteren, Marry M van den Heuvel-Eibrink, Eckart Meese, Christian Vokuhl, Ivo Leuschner, Norbert Graf, Roland Eils, Stefan M Pfister, Marcel Kool, Manfred Gessler, Mutations in the SIX1/2 pathway and the DROSHA/DGCR8 miRNA microprocessor complex underlie high-risk blastemal type Wilms tumors. Cancer cell 2015. PubMed citescites5959.
  9. Lei Gu, Sandra C Frommel, Christopher C Oakes, Ronald Simon, Katharina Grupp, Cristina Y Gerig, Dominik Bär, Mark D Robinson, Constance Baer, Melanie Weiss, Zuguang Gu, Matthieu Schapira, Ruprecht Kuner, Holger Sültmann, Maurizio Provenzano, Marie-Laure Yaspo, Benedikt Brors, Jan Korbel, Thorsten Schlomm, Guido Sauter, Roland Eils, Christoph Plass, Raffaella Santoro, BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence. Nature genetics 2015. PubMed citescites3939.
  10. Zuguang Gu, Lei Gu, Roland Eils, Matthias Schlesner, Benedikt Brors, circlize Implements and enhances circular visualization in R. Bioinformatics (Oxford, England) 2014. PubMed citescites6565.
  11. Zuguang Gu, Jin Wang, CePa: an R package for finding significant pathways weighted by multiple network centralities. Bioinformatics (Oxford, England) 2013. PubMed citescites1414.
  12. Chenfeng He, Ying-Xin Li, Guangxin Zhang, Zuguang Gu, Rong Yang, Jie Li, Zhi John Lu, Zhi-Hua Zhou, Chenyu Zhang, Jin Wang, MiRmat: mature microRNA sequence prediction. PloS one 2012. PubMed citescites1515.
  13. Zuguang Gu, Jialin Liu, Kunming Cao, Junfeng Zhang, Jin Wang, Centrality-based pathway enrichment: a systematic approach for finding significant pathways dominated by key genes. BMC systems biology 2012. PubMed citescites2929.
  14. Zuguang Gu, Chenyu Zhang, Jin Wang, Gene regulation is governed by a core network in hepatocellular carcinoma. BMC systems biology 2012. PubMed citescites1515.
  15. Zuguang Gu, Jie Li, Song Gao, Ming Gong, Junling Wang, Hua Xu, Chenyu Zhang, Jin Wang, InterMitoBase: an annotated database and analysis platform of protein-protein interactions for human mitochondria. BMC genomics 2011. PubMed citescites55.
  16. Lingyun Zhu, Qiang Wang, Lin Zhang, Zhixiang Fang, Fang Zhao, Zhiyuan Lv, Zuguang Gu, Junfeng Zhang, Jin Wang, Ke Zen, Yang Xiang, Dongjin Wang, Chen-Yu Zhang, Hypoxia induces PGC-1α expression and mitochondrial biogenesis in the myocardium of TOF patients. Cell research 2010. PubMed citescites5252.

Recodes were automatically retrieved from PubMed by easyPubMed and XML packages.